HawkDock combines ATTRACT for global macromolecular docking and HawkRank for scoring.
Please submit the larger protein as the receptor (< 1000 AA).
You can check the Help to be familiar with the workspace.
MM/GBSA is employed to predict the binding free energy and decomforse the free energy contributions to the binding free energy of a protein–protein complex in per-residue to help you analyze the binding structures.
Warning! Please check the Help when you first use MM/GBSA.