HawkDock

A web server for the structural prediction and analysis of protein-protein complex.



📢📢📢 HawkDock has been updated to version 2.

Please refer to the manual to familiarize yourself with the new features.

HawkDock combines ATTRACT for global macromolecular docking and HawkRank for scoring.

GeoDock is a deep-learning model for global macromolecular docking and shows better docking accuracy on Apo Structures.

Please submit the larger protein as the receptor (< 1000 AA).

You can check the Help to be familiar with the workspace.

Job Name (optional)
Email (optional)
Methods
Input Receptor
Input Ligand
Advanced options (optional)

Restraints

Help

Re-rank top10 models by

Example
Example of PDB File: Receptor Ligand Result
Example of Settings: Docking Refresh

(VD-)MM/GBSA is employed to predict the binding free energy and decomforse the free energy contributions to the binding free energy of a protein–protein complex in per-residue to help you analyze the binding structures.

Warning! Please check the Help when you first use MM/GBSA.

Job Name (optional)
Email (optional)
Methods
Input Complex
Chain ID of Receptor
Chain ID of Ligand
Mutation (optional)

Mutation ID of Receptor

Mutation ID of Ligand

Example of PDB File: Complex G-Result M-Result
Example of Settings: Refresh GBSA Mutation

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