4EF8

Target information

RCSB PDB
4EF8
Title
Crystal structure of dihydroorotate dehydrogenase from Leishmania major in complex with Phenyl isothiocyanate
Method
X-RAY DIFFRACTION
Resolution
1.56
Classification
Oxidoreductase/Oxidoreductase inhibitor
Organism
Leishmania major
Protein
Dihydroorotate dehydrogenase (fumarate) (Q4QEW7)
Year
2012
Publication Title
Target sites for the design of anti-trypanosomatid drugs based on the structure of dihydroorotate dehydrogenase.
Abstract

Trypanosomatids consist of a large group of flagellated parasitic protozoa, including parasites from the genera Leishmania and Trypanosoma, responsible for causing infections in millions of humans worldwide and for which currently no appropriate therapy is available. The significance of pyrimidines in cellular metabolism makes their de novo and salvage pathways ideal druggable targets for pharmacological intervention and open an opportunity for pharmaceutical innovation. In the current review, we discuss the merits in targeting the enzyme dihydroorotate dehydrogenase (DHODH), a flavin-dependent enzyme that catalyzes the fourth and only redox step in pyrimidine de novo biosynthesis, as a strategy for the development of efficient therapeutic strategies for trypanosomatid-related diseases.We also describe the advances and perspectives from the structural biology point of view in order to unravel the structure-function relationship of trypanosomatid DHODHs, and to identify and validate target sites for drug development.

External Link
RCSB PDB





Ligand information

HET
0FI
Chain ID
B
HET Number
401
Molecular Formula
C7H5NS
Structure
2D structure
IUPAC Name
isothiocyanatobenzene
InChI
InChI=1S/C7H5NS/c9-6-8-7-4-2-1-3-5-7/h1-5H
InChI Key
QKFJKGMPGYROCL-UHFFFAOYSA-N
Canonical SMILES
S=C=Nc1ccccc1
Bioactivity data
CI000021

Covalent Binding

Warhead
Isothiocyanate
Reaction Mechanism
Nucleophilic Addition
Residue
CYS : 150
Residue Chain
B
Interactions
Pharmacophore Model