3GCH

Target information

RCSB PDB
3GCH
Title
CHEMISTRY OF CAGED ENZYMES. BINDING OF PHOTOREVERSIBLE CINNAMATES TO CHYMOTRYPSIN
Method
X-RAY DIFFRACTION
Resolution
1.9
Classification
HYDROLASE (SERINE PROTEINASE)
Organism
Bos taurus
Protein
Chymotrypsinogen A (P00766)    Looking for covalent inhibitors of this target ?
Year
1989
Publication Title
Structure and activity of two photoreversible cinnamates bound to chymotrypsin.
Abstract

The serine protease gamma-chymotrypsin was covalently inhibited with two different photoreversible cinnamate compounds, and the structures of the resulting complexes were determined to 1.9-A resolution. The inhibitors show different kinetics of binding, inhibition, and nonphotochemical deacylation relative to each other in solution activity assays. The crystal structures of the enzyme-cinnamate complexes show that both compounds acylate serine 195 and that the two molecules are bound in similar nonproductive conformations which have drastic effects on their ability to turn over. Substitution of a diethylamino group on the para position of the cinnamate ring causes a 1000-fold increase in the thermal stability of the inhibitor toward hydrolysis and deacylation.

External Link
RCSB PDB





Ligand information

HET
OAC
Chain ID
C
HET Number
246
Molecular Formula
C16H13NO5
Structure
2D structure
IUPAC Name
(4-nitrophenyl) (E)-3-(2-hydroxyphenyl)-2-methyl-prop-2-enoate
InChI
InChI=1S/C16H13NO5/c1-11(10-12-4-2-3-5-15(12)18)16(19)22-14-8-6-13(7-9-14)17(20)21/h2-10,18H,1H3/b11-10+
InChI Key
KPUMOEKLLVLUNM-ZHACJKMWSA-N
Canonical SMILES
C\C(=C/c1ccccc1O)C(=O)Oc1ccc(cc1)[N+]([O-])=O
Bioactivity data
No bioactivity data available for this ligand.

Covalent Binding

Warhead
Ester
Reaction Mechanism
Transesterification
Residue
SER : 195
Residue Chain
C
Interactions
Pharmacophore Model