Compound information

Natural Products
ZC80916
Molecular Formula
C13H18N4O
Molecular Weight
246.148061196 g/mol
Structure
IUPAC Name
N-[[(3S)-1-pyrimidin-2-yl-3-piperidyl]methyl]prop-2-enamide
InChI
InChI=1S/C13H18N4O/c1-2-12(18)16-9-11-5-3-8-17(10-11)13-14-6-4-7-15-13/h2,4,6-7,11H,1,3,5,8-10H2,(H,16,18)/t11-/m0/s1
InChI Key
MKNQHOBOEBUCAB-NSHDSACASA-N
SMILES
C=CC(=O)NC[C@@H]1CCCN(c2ncccn2)C1
Source
ZINC001875366664

Warheads

Acrylamide


ADMET Property

Physicochemical Property

Property Value Property Value
Heavy Atom Count 18 Ring Count 2
Heteroatom Count 5 Rotatable Bond Count 4
Hydrogen Bond Acceptor Count 4 Hydrogen Bond Donor Count 1
Topological Polar Surface Area 58.12 Å2 LogP 1.488
LogS -1.875 LogD 1.121


Absorption

Property Value Property Value
Pgp inhibitor 0.008 Pgp substrate 0.08
HIA 0.967 F20 % 0.99
F30 % 0.772 Caco-2 -4.505
MDCK -4.53


Distribution

Property Value Property Value
BBB Penetration 0.89 PPB 74.11
VD 0.404 Fu 0.223


Metabolism

Property Value Property Value
CYP1A2 inhibitor 0.055 CYP1A2 substrate 0.594
CYP2A6 substrate 0.856 CYP2B6 substrate 0.77
CYP2C19 inhibitor 0.338 CYP2C19 substrate 0.818
CYP2C8 substrate 0.654 CYP2C9 inhibitor 0.01
CYP2C9 substrate 1.0 CYP2D6 inhibitor 0.044
CYP2D6 substrate 0.996 CYP2E1 substrate 0.486
CYP3A4 inhibitor 0.018 CYP3A4 substrate 0.999


Excretion

Property Value Property Value
T1/2 0.69 CL 5.342


Toxicity

Property Value Property Value
hERG Blockers 0.062 Hepatotoxicity 0.922
Mutagenicity 0.343 Rat Oral Acute Toxicity 0.297
FDAMDD 0.382 Skin Sensitization 0.926
Carcinogenicity 0.086 Eye Corrosion 0.275
Eye Irritation 0.966 Respiratory Toxicity 0.568


Environmental Toxicity

Property Value Property Value
Bioconcentration Factors 0.37 IGC50 1.872
LC50FM 3.003 LC50DM 3.312


Tox21 Pathway

Property Value Property Value
NR-AR 0.084 NR-AR-LBD 0.198
NR-AhR 0.002 NR-Aromatase 0.029
NR-ER 0.195 NR-ER-LBD 0.296
NR-PPAR-gamma 0.224 SR-ARE 0.574
SR-ATAD5 0.516 SR-HSE 0.161
SR-MMP 0.011 SR-p53 0.055


Similar covalent inhibitors

CI004419

Similarity Score: 0.51



Similar covalent drugs

No similar covalent drugs found for this compound.