Compound information

Natural Products
ZC2796098
Molecular Formula
C24H22N8O2
Molecular Weight
454.186571944 g/mol
Structure
IUPAC Name
1-(1H-benzimidazol-2-yl)-3-[[3-[(1H-benzimidazol-2-ylcarbamoylamino)methyl]phenyl]methyl]urea
InChI
InChI=1S/C24H22N8O2/c33-23(31-21-27-17-8-1-2-9-18(17)28-21)25-13-15-6-5-7-16(12-15)14-26-24(34)32-22-29-19-10-3-4-11-20(19)30-22/h1-12H,13-14H2,(H3,25,27,28,31,33)(H3,26,29,30,32,34)
InChI Key
DKVWNLQGGGSWOT-UHFFFAOYSA-N
SMILES
O=C(NCc1cccc(CNC(=O)Nc2nc3ccccc3[nH]2)c1)Nc1nc2ccccc2[nH]1
Source
ZINC000009631522

Warheads

Urea carbonyl
Urea carbonyl


ADMET Property

Physicochemical Property

Property Value Property Value
Heavy Atom Count 34 Ring Count 5
Heteroatom Count 10 Rotatable Bond Count 6
Hydrogen Bond Acceptor Count 4 Hydrogen Bond Donor Count 6
Topological Polar Surface Area 139.62 Å2 LogP 3.219
LogS -6.401 LogD 3.527


Absorption

Property Value Property Value
Pgp inhibitor 0.739 Pgp substrate 0.019
HIA 0.0 F20 % 0.024
F30 % 0.0 Caco-2 -5.162
MDCK -5.536


Distribution

Property Value Property Value
BBB Penetration 0.131 PPB 98.036
VD 1.368 Fu 1.941


Metabolism

Property Value Property Value
CYP1A2 inhibitor 0.853 CYP1A2 substrate 0.858
CYP2A6 substrate 0.356 CYP2B6 substrate 0.556
CYP2C19 inhibitor 0.954 CYP2C19 substrate 0.911
CYP2C8 substrate 0.891 CYP2C9 inhibitor 0.78
CYP2C9 substrate 0.996 CYP2D6 inhibitor 0.772
CYP2D6 substrate 0.63 CYP2E1 substrate 0.659
CYP3A4 inhibitor 0.935 CYP3A4 substrate 1.0


Excretion

Property Value Property Value
T1/2 0.866 CL 3.937


Toxicity

Property Value Property Value
hERG Blockers 0.092 Hepatotoxicity 0.974
Mutagenicity 0.318 Rat Oral Acute Toxicity 0.004
FDAMDD 0.917 Skin Sensitization 0.0
Carcinogenicity 0.363 Eye Corrosion 0.002
Eye Irritation 0.0 Respiratory Toxicity 0.175


Environmental Toxicity

Property Value Property Value
Bioconcentration Factors 0.86 IGC50 3.796
LC50FM -2.568 LC50DM -2.344


Tox21 Pathway

Property Value Property Value
NR-AR 0.361 NR-AR-LBD 0.414
NR-AhR 0.996 NR-Aromatase 0.027
NR-ER 0.71 NR-ER-LBD 0.286
NR-PPAR-gamma 0.356 SR-ARE 0.88
SR-ATAD5 0.69 SR-HSE 0.025
SR-MMP 0.818 SR-p53 0.838


Similar covalent inhibitors

CI005360

Similarity Score: 0.51



Similar covalent drugs

No similar covalent drugs found for this compound.