7CBT
Target information
- RCSB PDB
- 7CBT
- Title
- The crystal structure of SARS-CoV-2 main protease in complex with GC376
- Method
- X-RAY DIFFRACTION
- Resolution
- 2.346
- Classification
- VIRAL PROTEIN
- Organism
- Severe acute respiratory syndrome coronavirus 2
- Protein
- Replicase polyprotein 1ab (P0DTD1)    Looking for covalent inhibitors of this target ?
- Year
- 2021
- Publication Title
- The preclinical inhibitor GS441524 in combination with GC376 efficaciously inhibited the proliferation of SARS-CoV-2 in the mouse respiratory tract.
- Abstract
-
The unprecedented coronavirus disease 2019 (COVID-19) pandemic, caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is a serious threat to global public health. Development of effective therapies against SARS-CoV-2 is urgently needed. Here, we evaluated the antiviral activity of a remdesivir parent nucleotide analog, GS441524, which targets the coronavirus RNA-dependent RNA polymerase enzyme, and a feline coronavirus prodrug, GC376, which targets its main protease, using a mouse-adapted SARS-CoV-2 infected mouse model. Our results showed that GS441524 effectively blocked the proliferation of SARS-CoV-2 in the mouse upper and lower respiratory tracts via combined intranasal (i.n.) and intramuscular (i.m.) treatment. However, the ability of high-dose GC376 (i.m. or i.n. and i.m.) was weaker than GS441524. Notably, low-dose combined application of GS441524 with GC376 could effectively protect mice against SARS-CoV-2 infection via i.n. or i.n. and i.m. treatment. Moreover, we found that the pharmacokinetic properties of GS441524 is better than GC376, and combined application of GC376 and GS441524 had a synergistic effect. Our findings support the further evaluation of the combined application of GC376 and GS441524 in future clinical studies.
- External Link
- RCSB PDB
Ligand information
- HET
- K36
- Chain ID
- A
- HET Number
- 401
- Molecular Formula
- C21H31N3O8S
- Structure
-
- IUPAC Name
- (2S)-2-[[(2S)-2-(benzyloxycarbonylamino)-4-methyl-pentanoyl]amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid
- InChI
- InChI=1S/C21H31N3O8S/c1-13(2)10-16(24-21(28)32-12-14-6-4-3-5-7-14)19(26)23-17(20(27)33(29,30)31)11-15-8-9-22-18(15)25/h3-7,13,15-17,20,27H,8-12H2,1-2H3,(H,22,25)(H,23,26)(H,24,28)(H,29,30,31)/t15-,16-,17-,20?/m0/s1
- InChI Key
- BSPZFJDYQHDZNR-HTCLRFROSA-N
- Canonical SMILES
- CC(C)C[C@H](NC(=O)OCc1ccccc1)C(=O)N[C@@H](C[C@@H]1CCNC1=O)C(O)S(=O)(=O)O
- Bioactivity data
- CI006843
Covalent Binding
- Warhead
- Sulfonic acid
- Reaction Mechanism
- Nucleophilic Substitution
- Residue
- CYS : 145
- Residue Chain
- A
- Interactions
- Pharmacophore Model