5U4G

Target information

RCSB PDB
5U4G
Title
Wild-type Transthyretin in complex with 2-Boronic Acid-1-[(1E)-2-(3-boronic acid)ethenyl]-4-chlorobenzene
Method
X-RAY DIFFRACTION
Resolution
1.8
Classification
TRANSPORT PROTEIN
Organism
Homo sapiens
Protein
Transthyretin (P02766)    Looking for covalent inhibitors of this target ?
Year
2016
Publication Title
Stilbene Boronic Acids Form a Covalent Bond with Human Transthyretin and Inhibit Its Aggregation.
Abstract

Transthyretin (TTR) is a homotetrameric protein. Its dissociation into monomers leads to the formation of fibrils that underlie human amyloidogenic diseases. The binding of small molecules to the thyroxin-binding sites in TTR stabilizes the homotetramer and attenuates TTR amyloidosis. Herein, we report on boronic acid-substituted stilbenes that limit TTR amyloidosis in vitro. Assays of affinity for TTR and inhibition of its tendency to form fibrils were coupled with X-ray crystallographic analysis of nine TTR??ligand complexes. The ensuing structure-function data led to a symmetrical diboronic acid that forms a boronic ester reversibly with serine 117. This diboronic acid inhibits fibril formation by both wild-type TTR and a common disease-related variant, V30M TTR, as effectively as does tafamidis, a small-molecule drug used to treat TTR-related amyloidosis in the clinic. These findings establish a new modality for covalent inhibition of fibril formation and illuminate a path for future optimization.

External Link
RCSB PDB





Ligand information

HET
7UV
Chain ID
A
HET Number
200
Molecular Formula
C14H13B2ClO4
Structure
2D structure
IUPAC Name
[3-[(E)-2-(4-borono-2-chloro-phenyl)vinyl]phenyl]boronic acid
InChI
InChI=1S/C14H13B2ClO4/c17-14-9-13(16(20)21)7-6-11(14)5-4-10-2-1-3-12(8-10)15(18)19/h1-9,18-21H/b5-4+
InChI Key
SSNLOHQENBGYSW-SNAWJCMRSA-N
Canonical SMILES
OB(O)c1cccc(c1)/C=C/c2ccc(cc2Cl)B(O)O
Bioactivity data
CI003775

Covalent Binding

Warhead
Boronic Acid
Reaction Mechanism
Boronic Acid Addition
Residue
SER : 117
Residue Chain
A
Interactions
Pharmacophore Model