5U4F

Target information

RCSB PDB
5U4F
Title
Wild-type Transthyretin in complex with 1,1'-(1E)-(1,2-Ethenediyl)bis[2-chloro-4-boronic acid]benzene
Method
X-RAY DIFFRACTION
Resolution
1.5
Classification
TRANSPORT PROTEIN
Organism
Homo sapiens
Protein
Transthyretin (P02766)    Looking for covalent inhibitors of this target ?
Year
2016
Publication Title
Stilbene Boronic Acids Form a Covalent Bond with Human Transthyretin and Inhibit Its Aggregation.
Abstract

Transthyretin (TTR) is a homotetrameric protein. Its dissociation into monomers leads to the formation of fibrils that underlie human amyloidogenic diseases. The binding of small molecules to the thyroxin-binding sites in TTR stabilizes the homotetramer and attenuates TTR amyloidosis. Herein, we report on boronic acid-substituted stilbenes that limit TTR amyloidosis in vitro. Assays of affinity for TTR and inhibition of its tendency to form fibrils were coupled with X-ray crystallographic analysis of nine TTR??ligand complexes. The ensuing structure-function data led to a symmetrical diboronic acid that forms a boronic ester reversibly with serine 117. This diboronic acid inhibits fibril formation by both wild-type TTR and a common disease-related variant, V30M TTR, as effectively as does tafamidis, a small-molecule drug used to treat TTR-related amyloidosis in the clinic. These findings establish a new modality for covalent inhibition of fibril formation and illuminate a path for future optimization.

External Link
RCSB PDB





Ligand information

HET
IWW
Chain ID
A
HET Number
200
Molecular Formula
C14H12B2Cl2O4
Structure
2D structure
IUPAC Name
[4-[(E)-2-(4-borono-2-chloro-phenyl)vinyl]-3-chloro-phenyl]boronic acid
InChI
InChI=1S/C14H12B2Cl2O4/c17-13-7-11(15(19)20)5-3-9(13)1-2-10-4-6-12(16(21)22)8-14(10)18/h1-8,19-22H/b2-1+
InChI Key
HTUPKLSVPPCVMY-OWOJBTEDSA-N
Canonical SMILES
OB(O)c1ccc(c(Cl)c1)/C=C/c2ccc(cc2Cl)B(O)O
Bioactivity data
CI003904

Covalent Binding

Warhead
Boronic Acid
Reaction Mechanism
Boronic Acid Addition
Residue
SER : 117
Residue Chain
A
Interactions
Pharmacophore Model